Multimodal cell-free DNA whole-genome TAPS is sensitive and reveals specific cancer signals.
Vavoulis DV. et al, (2025), Nature communications, 16
A method for quantitative and base-resolution sequencing of pseudouridine.
(2024), Nature methods, 21, 1984 - 1985
Prospective cohort for early detection of liver cancer (Pearl): a study protocol
Khanna K. et al, (2024), BMJ Open, 14, e085541 - e085541
Absolute quantitative and base-resolution sequencing reveals comprehensive landscape of pseudouridine across the human transcriptome
Xu H. et al, (2024), Nature Methods
Chemical Biology of Nucleic Acid Modifications – Celebrating the Groundbreaking Contributions of Chuan He
Song CX. et al, (2024), Israel Journal of Chemistry, 64
Direct, Quantitative, and Base-Resolution Sequencing of DNA and RNA Modifications
Xu H. and Song CX., (2024), Israel Journal of Chemistry
Mapping epigenetic modifications by sequencing technologies.
Chen X. et al, (2023), Cell death and differentiation
Tumor monocyte content predicts immunochemotherapy outcomes in esophageal adenocarcinoma.
Carroll TM. et al, (2023), Cancer cell, 41, 1222 - 1241.e7
Disparities in care and outcomes for primary liver cancer in England during 2008–2018: a cohort study of 8.52 million primary care population using the QResearch database
Liao W. et al, (2023), eClinicalMedicine, 59, 101969 - 101969
Modular Oxidation of Cytosine Modifications and Their Application in Direct and Quantitative Sequencing of 5-Hydroxymethylcytosine.
Xu H. et al, (2023), Journal of the American Chemical Society, 145, 7095 - 7100
TAPS: The Development of a Direct and Base-Resolution Sequencing Method for DNA Methylation
Liu Y. and Song C-X., (2022), ACS Chemical Biology
Subtraction-free and bisulfite-free specific sequencing of 5-methylcytosine and its oxidized derivatives at base resolution
Liu Y. et al, (2021), Nature Communications, 12
Cell-free DNA TAPS provides multimodal information for early cancer detection.
Siejka-Zielińska P. et al, (2021), Science advances, 7
Endonuclease enrichment TAPS for cost-effective genome-wide base-resolution DNA methylation detection.
Cheng J. et al, (2021), Nucleic acids research, 49
Accurate targeted long-read DNA methylation and hydroxymethylation sequencing with TAPS
Liu Y. et al, (2020), Genome Biology, 21
Mapping the epigenetic modifications of DNA and RNA.
Zhao L-Y. et al, (2020), Protein & cell, 11, 792 - 808
Homoharringtonine exhibits potent anti-tumor effect and modulates DNA epigenome in acute myeloid leukemia by targeting SP1/TET1/5hmC.
Li C. et al, (2020), Haematologica, 105, 148 - 160
5-Carboxylcytosine is resistant towards phosphodiesterase I digestion: implications for epigenetic modification quantification by mass spectrometry
Yuan F. et al, (2019), RSC ADVANCES, 9, 29010 - 29014
Bisulfite-free direct detection of 5-methylcytosine and 5-hydroxymethylcytosine at base resolution.
Liu Y. et al, (2019), Nature biotechnology, 37, 424 - 429